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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1739789_1740196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1739789 - 1740196

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGGTTCTATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

CAGAATCTAACC

Flanking Amino Acid:

VSALTAAMFLAYNALLTRLQ

Intron Amino Acid Position:

1556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

75.4

0.57

70.1

40.4

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

44.4

-0.4

1.8

49.91

40.2

Associated Gene:

Gene:

NUP210L

Ensembl Gene ID:

ENSAPLG00000014606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015245

1738560 - 1766515

27956