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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1760571_1760841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1760571 - 1760841

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTAATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATGTTCTTAATT

Flanking Amino Acid:

KQGVFVLAEEGNQKPGQTFC

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.1

31.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

80.2

0.68

0.8

35.1

Minor 5ss

44.3

-0.6

2.8

57.2

47.1

Minor BPS

78.9

0.99

1.1

85.69

34.7

Associated Gene:

Gene:

NUP210L

Ensembl Gene ID:

ENSAPLG00000014606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015245

1738560 - 1766515

27956