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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1764967_1765521_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

1764967 - 1765521

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

TGCGAGAATAAAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

AATCCCTAAAGA

Flanking Amino Acid:

GQSTLAFVHKNVHMRAASGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.21

1.2

59.5

40.7

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

47.9

-0.1

1.2

41.6

41.2

Minor 5ss

1.38

0.9

84.7

25.1

Minor BPS

51.6

0.05

64.56

41.5

Associated Gene:

Gene:

NUP210L

Ensembl Gene ID:

ENSAPLG00000014606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015245

1738560 - 1766515

27956