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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1773754_1777034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1773754 - 1777034

Intron Length:

3281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGTG

5'SS Class:

major

3'SS Sequence:

CGTCTTTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAGAA

U12 Branch Point Sequence:

TGTGCCTAAAGG

Flanking Amino Acid:

GHLPWFPQPQPVYPVSRRVD

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

40.5

Major BPS

54.8

0.12

1.2

52.7

43.2

Major PPT

0.72

0.8

75.9

32.8

Minor 5ss

38.7

-1.3

49.5

46.8

Minor BPS

49.1

-0.2

2.1

59.57

47.9

Associated Gene:

Gene:

TPM3

Ensembl Gene ID:

ENSAPLG00000015228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048449

1772739 - 1789996

17258

ENSAPLT00000048120

1772739 - 1784284

11546