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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1780966_1781422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1780966 - 1781422

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

TCCTTTTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGACAC

U12 Branch Point Sequence:

TCCTTTTCCACA

Flanking Amino Acid:

LKSLEAQAEKYSQKEDKYEE

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

48.1

-0.1

1.2

56.1

39.6

Major PPT

83.5

0.75

0.7

79.2

26.5

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

46.9

-0.2

1.9

42.5

Associated Gene:

Gene:

TPM3

Ensembl Gene ID:

ENSAPLG00000015228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036787

1772739 - 1784284

11546

ENSAPLT00000036300

1779569 - 1789996

10428

ENSAPLT00000048449

1772739 - 1789996

17258

ENSAPLT00000026763

1777433 - 1789996

12564

ENSAPLT00000048120

1772739 - 1784284

11546

ENSAPLT00000015879

1773634 - 1789996

16363

ENSAPLT00000043039

1772739 - 1789996

17258