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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1784085_1784179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1784085 - 1784179

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CCGCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTCAC

U12 Branch Point Sequence:

GCTGAGTCACCC

Flanking Amino Acid:

GSTCRRLGAQAEAEVASLNR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

74.7

29.7

Major BPS

49.7

-0

1.3

55.1

42.1

Major PPT

67.2

0.39

0.8

57.6

33.3

Minor 5ss

33.4

-1.9

2.8

39.2

46.2

Minor BPS

35.4

-1.1

2.3

43.77

43.8

Associated Gene:

Gene:

TPM3

Ensembl Gene ID:

ENSAPLG00000015228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036787

1772739 - 1784284

11546

ENSAPLT00000048120

1772739 - 1784284

11546