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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1797197_1797489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1797197 - 1797489

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

CCTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCGTGAT

U12 Branch Point Sequence:

CCCGCCGTGATG

Flanking Amino Acid:

YQDALNELANLTKARAGSSQ

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

74.7

35.4

Major BPS

56.3

0.16

1.3

48.7

45.1

Major PPT

82.1

0.72

0.7

76.4

25.6

Minor 5ss

36.1

-1.6

3.5

45.5

Minor BPS

42.5

-0.7

2.1

40.94

44.7

Associated Gene:

Gene:

C1orf43

Ensembl Gene ID:

ENSAPLG00000015388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016057

1796998 - 1799408

2411

ENSAPLT00000035712

1796998 - 1799408

2411