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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1797549_1797654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1797549 - 1797654

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGCAG

U12 Branch Point Sequence:

TTCTGTTTGCGT

Flanking Amino Acid:

GYESARYGTGVFGKPEYLKY

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.7

41.3

Major BPS

44.4

-0.3

1.8

57.1

49.4

Major PPT

74.4

0.55

65.9

45.3

Minor 5ss

40.2

-1.1

2.8

45.4

42.5

Minor BPS

36.4

-0.9

3.7

65.84

45.8

Associated Gene:

Gene:

C1orf43

Ensembl Gene ID:

ENSAPLG00000015388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035712

1796998 - 1799408

2411

ENSAPLT00000016057

1796998 - 1799408

2411