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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1797822_1797956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1797822 - 1797956

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

TGCGCCTCAGGC

Flanking Amino Acid:

MKALDAIRTSEIPFHADGRY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

41.1

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

87.4

0.84

0.8

80.5

Minor 5ss

35.8

-1.6

3.3

43.3

45.4

Minor BPS

42.9

-0.5

2.1

51.01

45.8

Associated Gene:

Gene:

C1orf43

Ensembl Gene ID:

ENSAPLG00000015388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035712

1796998 - 1799408

2411

ENSAPLT00000038624

1796998 - 1799408

2411