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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1798011_1798165_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1798011 - 1798165

Intron Length:

155

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCTGGCCGC

5'SS Class:

weak_major

3'SS Sequence:

TTTCTCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

TGCTGCAGAGCT

Flanking Amino Acid:

LLQLETQGTPGCYNYLYRMK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.3

49.8

43.3

Major BPS

63.7

0.34

1.6

39.9

Major PPT

84.7

0.78

0.7

77.3

31.4

Minor 5ss

-3.1

3.9

30.7

36.8

Minor BPS

42.1

-0.5

2.2

62.76

46.6

Associated Gene:

Gene:

C1orf43

Ensembl Gene ID:

ENSAPLG00000015388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038624

1796998 - 1799408

2411

ENSAPLT00000035712

1796998 - 1799408

2411