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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1798284_1798472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1798284 - 1798472

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGCC

5'SS Class:

major

3'SS Sequence:

TTCTGCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATTT

Flanking Amino Acid:

HVPVGQHAPKDLKEEIDIRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.2

68.2

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.8

0.74

0.8

77.1

31.6

Minor 5ss

28.9

-2.4

3.1

36.3

40.7

Minor BPS

63.6

0.51

1.5

78.46

Associated Gene:

Gene:

C1orf43

Ensembl Gene ID:

ENSAPLG00000015388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038624

1796998 - 1799408

2411

ENSAPLT00000016057

1796998 - 1799408

2411