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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1798575_1799339_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1798575 - 1799339

Intron Length:

765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGCG

5'SS Class:

major

3'SS Sequence:

CCGGGGGGTCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

GGTGCTCTGACC

Flanking Amino Acid:

VVLVMAYGSLVFVLLFIFVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

59.2

39.7

Major BPS

69.1

0.47

60.7

37.6

Major PPT

48.1

-0.1

1.1

34.1

40.9

Minor 5ss

24.2

-3

3.3

26.6

37.9

Minor BPS

48.8

-0.1

1.8

59.92

39.3

Associated Gene:

Gene:

C1orf43

Ensembl Gene ID:

ENSAPLG00000015388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038624

1796998 - 1799408

2411

ENSAPLT00000016057

1796998 - 1799408

2411