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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1802876_1803721_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1802876 - 1803721

Intron Length:

846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCATCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTCTTTTGATG

Flanking Amino Acid:

SQTQHKQRPQATAEQIRLAQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.9

0.72

0.8

73.5

36.9

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

56.2

0.05

1.3

58.52

38.1

Associated Gene:

Gene:

UBAP2L

Ensembl Gene ID:

ENSAPLG00000015544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016263

1802786 - 1831275

28490