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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1806802_1807038_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1806802 - 1807038

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTACGGACC

5'SS Class:

weak_major

3'SS Sequence:

AAAGCAGGAGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

TCCTCCCTAAAG

Flanking Amino Acid:

RGRGASRGREFLKVSLPCSL

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.21

1.2

39.8

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

-0.6

1.6

25.9

35.6

Minor 5ss

34.4

-1.8

3.4

44.5

43.2

Minor BPS

54.9

0.02

1.9

61.25

46.2

Associated Gene:

Gene:

UBAP2L

Ensembl Gene ID:

ENSAPLG00000015544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016263

1802786 - 1831275

28490