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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1807208_1808205_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1807208 - 1808205

Intron Length:

998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGTCAGCG

5'SS Class:

weak_major

3'SS Sequence:

GTGTTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

TGTTTCTTACAG

Flanking Amino Acid:

WASGRRVGEGRTFNPADYAE

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.9

0.09

1.2

43.4

38.2

Major BPS

60.7

0.27

65.3

28.1

Major PPT

82.7

0.74

0.9

76.5

37.7

Minor 5ss

37.4

-1.4

3.3

48.1

47.6

Minor BPS

57.3

0.09

1.8

64.96

42.7

Associated Gene:

Gene:

UBAP2L

Ensembl Gene ID:

ENSAPLG00000015544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016263

1802786 - 1831275

28490