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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1808319_1813004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1808319 - 1813004

Intron Length:

4686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

TGTTGTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

GCGCGCCTAACT

Flanking Amino Acid:

TGSFEPDDGTSAWRAATEEW

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

64.5

41.5

Major BPS

74.1

0.6

66.7

39.9

Major PPT

81.4

0.71

0.9

77.9

36.6

Minor 5ss

38.4

-1.3

3.4

50.1

40.9

Minor BPS

46.7

-0.1

2.1

62.87

46.6

Associated Gene:

Gene:

UBAP2L

Ensembl Gene ID:

ENSAPLG00000015544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016263

1802786 - 1831275

28490