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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1824004_1824482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1824004 - 1824482

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CTGCCCCTAACC

Flanking Amino Acid:

TPLQTTQAVEGATGPAVKSD

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

84.2

0.77

0.8

79.1

32.9

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

59.9

0.29

1.8

68.8

42.6

Associated Gene:

Gene:

UBAP2L

Ensembl Gene ID:

ENSAPLG00000015544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016263

1802786 - 1831275

28490