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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1829303_1829388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1829303 - 1829388

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTTCC

5'SS Class:

major

3'SS Sequence:

CTCCTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TGCTTCTCACTC

Flanking Amino Acid:

TFQYGPAVFPVAPTSSKQHG

Intron Amino Acid Position:

908

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

65.2

35.2

Major BPS

0.87

0.8

85.6

Major PPT

85.6

0.8

0.7

83.9

24.2

Minor 5ss

38.9

-1.2

2.9

42.2

Minor BPS

48.3

-0.1

1.8

58.42

41.2

Associated Gene:

Gene:

UBAP2L

Ensembl Gene ID:

ENSAPLG00000015544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016263

1802786 - 1831275

28490