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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1829495_1830665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1829495 - 1830665

Intron Length:

1171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGACCCCTAAGG

Flanking Amino Acid:

SGYGSHGYSAGVSVTSSNTG

Intron Amino Acid Position:

943

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.3

32.5

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

0.68

0.7

72.7

32.1

Minor 5ss

30.9

-2.2

3.4

38.5

41.1

Minor BPS

47.8

-0.3

55.76

44.6

Associated Gene:

Gene:

UBAP2L

Ensembl Gene ID:

ENSAPLG00000015544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016263

1802786 - 1831275

28490