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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1830734_1831002_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1830734 - 1831002

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTTAC

U12 Branch Point Sequence:

CTGGCCTTACTC

Flanking Amino Acid:

ISGSVYSKTQQSFEKQGFHT

Intron Amino Acid Position:

966

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

51.2

0.03

1.2

45.3

39.5

Major PPT

76.1

0.59

0.7

73.2

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

53.7

0.1

1.8

61.22

Associated Gene:

Gene:

UBAP2L

Ensembl Gene ID:

ENSAPLG00000015544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016263

1802786 - 1831275

28490