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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1856430_1856853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1856430 - 1856853

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAC

U12 Branch Point Sequence:

TACAGCTGCATC

Flanking Amino Acid:

KSLVQIHEKNGWYTPPKEDG

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.8

41.8

Major BPS

49.6

-0

1.4

51.3

43.9

Major PPT

83.1

0.74

0.9

80.5

Minor 5ss

33.5

-1.9

3.4

45.9

43.3

Minor BPS

40.3

-0.7

2.1

48.78

41.4

Associated Gene:

Gene:

UBE2Q1

Ensembl Gene ID:

ENSAPLG00000009365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043756

1855398 - 1864086

8689

ENSAPLT00000009798

1856398 - 1864086

7689