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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1856921_1857265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1856921 - 1857265

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TGATTGTCACCC

Flanking Amino Acid:

KARVQFGANKNQYSLTRAQQ

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

80.1

0.68

0.8

73.3

31.6

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

42.5

-0.5

2.3

55.68

42.5

Associated Gene:

Gene:

UBE2Q1

Ensembl Gene ID:

ENSAPLG00000009365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043756

1855398 - 1864086

8689

ENSAPLT00000009798

1856398 - 1864086

7689