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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1857362_1857622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1857362 - 1857622

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CCGGCCTCACTG

Flanking Amino Acid:

AICMELLTKQGWSSAYSIES

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.9

35.3

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

74.8

0.56

0.8

68.9

31.6

Minor 5ss

30.2

-2.3

2.9

36.9

40.4

Minor BPS

41.8

-0.7

1.9

38.28

45.5

Associated Gene:

Gene:

UBE2Q1

Ensembl Gene ID:

ENSAPLG00000009365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009798

1856398 - 1864086

7689

ENSAPLT00000043756

1855398 - 1864086

8689