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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1857672_1857962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1857672 - 1857962

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCTCACGTAACT

Flanking Amino Acid:

VRVVSPVLSGGYVLGGGAIC

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.5

32.9

Major BPS

72.7

0.56

30.1

Major PPT

68.9

0.43

67.8

32.7

Minor 5ss

30.1

-2.3

2.6

28.4

Minor BPS

54.4

0.22

2.2

78.43

43.5

Associated Gene:

Gene:

UBE2Q1

Ensembl Gene ID:

ENSAPLG00000009365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043756

1855398 - 1864086

8689

ENSAPLT00000009798

1856398 - 1864086

7689