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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1858444_1858748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1858444 - 1858748

Intron Length:

305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TTCCTTGGGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAC

U12 Branch Point Sequence:

CCCTCCAGACAC

Flanking Amino Acid:

SLYDWNVKILKQSLYLSWHA

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

67.1

38.1

Major BPS

67.8

0.44

30.1

Major PPT

65.7

0.35

1.1

60.7

44.7

Minor 5ss

33.4

-1.9

3.5

42.8

Minor BPS

40.1

-0.7

1.9

44.94

43.1

Associated Gene:

Gene:

UBE2Q1

Ensembl Gene ID:

ENSAPLG00000009365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043756

1855398 - 1864086

8689