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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1858810_1859277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1858810 - 1859277

Intron Length:

468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CTGTGCTGACAC

Flanking Amino Acid:

DIYRSPSFKGGYYAVELVND

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

76.5

39.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

79.4

0.66

0.8

72.7

32.1

Minor 5ss

36.8

-1.5

3.3

46.2

Minor BPS

42.3

-0.6

2.1

51.96

45.1

Associated Gene:

Gene:

UBE2Q1

Ensembl Gene ID:

ENSAPLG00000009365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043756

1855398 - 1864086

8689

ENSAPLT00000009798

1856398 - 1864086

7689