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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1862093_1862481_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1862093 - 1862481

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

GCTAACGGAGCG

Flanking Amino Acid:

MLDQPLPAEQSTQEEVSSEE

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

82.5

0.73

0.8

77.3

31.4

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

35.4

-1.2

2.2

38.98

43.5

Associated Gene:

Gene:

UBE2Q1

Ensembl Gene ID:

ENSAPLG00000009365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043756

1855398 - 1864086

8689

ENSAPLT00000009798

1856398 - 1864086

7689