Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_1862976_1863623_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1862976 - 1863623

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TCCTTGCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAA

U12 Branch Point Sequence:

GTCTCTCCAACG

Flanking Amino Acid:

GPVRIHCNITESYPAVPPIW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

55.5

0.14

1.3

66.7

39.7

Major PPT

76.8

0.6

0.8

68.5

37.4

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

48.3

-0.2

57.07

44.3

Associated Gene:

Gene:

UBE2Q1

Ensembl Gene ID:

ENSAPLG00000009365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009798

1856398 - 1864086

7689

ENSAPLT00000043756

1855398 - 1864086

8689