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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1870105_1870186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1870105 - 1870186

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATAAC

U12 Branch Point Sequence:

AACCCCGTAACT

Flanking Amino Acid:

MVSLAQLISVHEREQIMTTN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

0.08

1.1

55.6

Major PPT

77.7

0.62

0.7

72.4

25.7

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

56.2

0.27

2.1

73.2

43.2

Associated Gene:

Gene:

CHRNB2

Ensembl Gene ID:

ENSAPLG00000009547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038694

1869087 - 1872934

3848

ENSAPLT00000009935

1869250 - 1872753

3504