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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1870232_1870756_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1870232 - 1870756

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CGGGTGCCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

CCGGGCTGAACG

Flanking Amino Acid:

IMTTNVWLTQEWEDYRLTWK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

53.3

0.08

1.1

46.6

41.5

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

43.7

-0.6

43.2

48.2

Associated Gene:

Gene:

CHRNB2

Ensembl Gene ID:

ENSAPLG00000009547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038694

1869087 - 1872934

3848

ENSAPLT00000009935

1869250 - 1872753

3504