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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1870867_1870976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1870867 - 1870976

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGTT

5'SS Class:

major

3'SS Sequence:

CCCTTTGCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGCAT

U12 Branch Point Sequence:

CTGACTGCATCC

Flanking Amino Acid:

IWLPDVVLYNNADGMYEVSF

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

35.3

Major BPS

53.6

0.09

1.4

65.3

41.5

Major PPT

68.1

0.41

0.8

60.8

35.2

Minor 5ss

38.9

-1.2

3.7

57.4

41.7

Minor BPS

38.2

-0.9

2.2

46.51

Associated Gene:

Gene:

CHRNB2

Ensembl Gene ID:

ENSAPLG00000009547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038694

1869087 - 1872934

3848

ENSAPLT00000009935

1869250 - 1872753

3504