Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_1876478_1876624_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1876478 - 1876624

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAGAA

U12 Branch Point Sequence:

CTCTACAGAAAA

Flanking Amino Acid:

QGKLRTKVENGEGTIPVESS

Intron Amino Acid Position:

944

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

36.6

Major BPS

57.1

0.18

52.9

34.1

Major PPT

77.4

0.62

0.9

72.5

37.6

Minor 5ss

-2.2

3.2

41.8

Minor BPS

44.1

-0.4

1.9

55.71

42.5

Associated Gene:

Gene:

ADAR

Ensembl Gene ID:

ENSAPLG00000009658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010096

1874142 - 1886874

12733