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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1879273_1880283_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1879273 - 1880283

Intron Length:
1011

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAACATCC

5'SS Class:
major

3'SS Sequence:
ATCCCCGTTCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTGCAT

U12 Branch Point Sequence:
GGTCTCTTAGCC

Flanking Amino Acid:
ERMEGINITELPVSGSTLHD

Intron Amino Acid Position:
768

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.1
69.5
36.3

Major BPS
62.4
0.31
1.4
73.6
41.8

Major PPT
71.7
0.49
0.9
61.6
39.4

Minor 5ss
44.7
-0.6
2.8
60.7
43.8

Minor BPS
57.8
0.22
1.6
65.49
39.5

Associated Gene:

Gene:
ADAR

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1874142 - 1886874
12733