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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1907981_1908187_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1907981 - 1908187

Intron Length:
207

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTAAGTGGG

5'SS Class:
major

3'SS Sequence:
TCCTCCTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGGGAA

U12 Branch Point Sequence:
GGTGCATCCACG

Flanking Amino Acid:
HQRKFLQAIHQLRSVKMEQR

Intron Amino Acid Position:
547

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.8
0.56
1.1
61.2
43.9

Major BPS
48.8
-0
1.5
49.1
46.3

Major PPT
76.9
0.6
0.7
68.8
31.6

Minor 5ss
34.3
-1.8
3.2
45.8
43.4

Minor BPS
40.6
-0.8
2.2
46.55
45.5

Associated Gene:

Gene:
KCNN3

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1905346 - 1927018
21673