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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1908316_1910170_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1908316 - 1910170

Intron Length:
1855

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAAGGTGC

5'SS Class:
major

3'SS Sequence:
CCTTCTCTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CGGTGAC

U12 Branch Point Sequence:
GGGCCGGTGACC

Flanking Amino Acid:
FMMDTQLTKRIKNAAANVLR

Intron Amino Acid Position:
505

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.1
0.69
1
64.8
42.3

Major BPS
47.5
-0.1
1.3
38.2
41.7

Major PPT
85.6
0.8
0.7
80.2
25.1

Minor 5ss
36.6
-1.5
3.3
41.6
45.3

Minor BPS
39.9
-0.8
2.5
48.59
41.5

Associated Gene:

Gene:
KCNN3

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1905346 - 1927018
21673