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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1931220_1931367_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1931220 - 1931367

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

CCTTTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTGCAA

U12 Branch Point Sequence:

AAGGCGAGCACC

Flanking Amino Acid:

GSAQRDLFDMKPFEDALRVP

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

59.5

39.8

Major BPS

43.2

-0.4

1.5

49.1

46.3

Major PPT

78.6

0.64

0.7

73.1

25.1

Minor 5ss

28.8

-2.4

29.1

36.7

Minor BPS

32.3

-1.4

2.3

39.53

39.2

Associated Gene:

Gene:

SHC1

Ensembl Gene ID:

ENSAPLG00000020291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040956

1930019 - 1938675

8657

ENSAPLT00000040719

1930019 - 1938675

8657

ENSAPLT00000009151

1930019 - 1934774

4756