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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1931720_1931935_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1931720 - 1931935

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

GCTCACTCACCT

Flanking Amino Acid:

QTPNHLGATLPVGQTSGGEY

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

64.9

0.37

29.8

Major PPT

85.7

0.8

0.7

80.5

24.8

Minor 5ss

36.8

-1.5

3.5

53.4

44.8

Minor BPS

45.9

-0.2

63.74

45.7

Associated Gene:

Gene:

SHC1

Ensembl Gene ID:

ENSAPLG00000020291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040956

1930019 - 1938675

8657

ENSAPLT00000040719

1930019 - 1938675

8657

ENSAPLT00000009151

1930019 - 1934774

4756