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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1932105_1932213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1932105 - 1932213

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGG

5'SS Class:

major

3'SS Sequence:

CTCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GGCTGCTGAGCT

Flanking Amino Acid:

NPPKLVTPHDRMAGFDGSAW

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

70.7

0.47

0.7

61.5

Minor 5ss

37.4

-1.4

3.1

48.3

47.5

Minor BPS

45.7

-0.2

2.1

62.56

46.8

Associated Gene:

Gene:

SHC1

Ensembl Gene ID:

ENSAPLG00000020291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009151

1930019 - 1934774

4756

ENSAPLT00000040956

1930019 - 1938675

8657

ENSAPLT00000040719

1930019 - 1938675

8657