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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1933182_1933360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1933182 - 1933360

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

CCCTTCCCAATG

Flanking Amino Acid:

GAKGAVRRRKPCGRSLNSIL

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

70.6

0.46

0.8

61.2

35.1

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

43.4

-0.6

1.9

43.2

Associated Gene:

Gene:

SHC1

Ensembl Gene ID:

ENSAPLG00000020291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040956

1930019 - 1938675

8657

ENSAPLT00000040719

1930019 - 1938675

8657

ENSAPLT00000009151

1930019 - 1934774

4756