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Intron Name: Anas_platyrhynchos_platyrhynchos_26_197864_198457_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197864 - 198457

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TTGCCTCTGAGC

Flanking Amino Acid:

LQTEAPGLVPSLGSFGMPRM

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

75.3

40.4

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

88.5

0.87

0.6

Minor 5ss

34.1

-1.8

3.2

49.3

46.5

Minor BPS

46.4

-0.3

1.9

59.61

Associated Gene:

Gene:

UBQLN4

Ensembl Gene ID:

ENSAPLG00000009055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022838

197103 - 206358

9256