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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2008598_2008696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2008598 - 2008696

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCCG

5'SS Class:

major

3'SS Sequence:

TCTCTTCCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTCTGCTCACCG

Flanking Amino Acid:

LRPEVKIEDLENFNPEIPKL

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

62.3

43.9

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

81.5

0.71

0.7

76.9

25.1

Minor 5ss

28.7

-2.4

2.7

25.5

36.2

Minor BPS

43.9

-0.6

2.2

50.75

49.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002154

2004939 - 2008818

3880