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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2016073_2017152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2016073 - 2017152

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTGCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

GTCCCCCTCACG

Flanking Amino Acid:

RSLSRAVLTMTTCSCRRKSR

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

0.41

0.8

57.9

33.2

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

46.4

-0.4

2.1

54.45

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035905

2014931 - 2017689

2759