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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2027071_2027224_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2027071 - 2027224

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

CGCTCCTCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

GAGAGCTCACGG

Flanking Amino Acid:

EVSVVGKINKVLVRYLREDN

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

68.7

37.6

Major BPS

0.28

1.1

63.1

35.8

Major PPT

71.2

0.48

0.8

64.9

30.7

Minor 5ss

32.1

-2

3.3

35.7

41.2

Minor BPS

33.2

-1.4

2.1

30.02

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032175

2023045 - 2028485

5441

ENSAPLT00000028061

2023045 - 2028485

5441

ENSAPLT00000010407

2018166 - 2032746

14581

ENSAPLT00000032572

2018166 - 2032746

14581