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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2032570_2032753_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2032570 - 2032753

Intron Length:

184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCATTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTGTCTTCATT

Flanking Amino Acid:

MEDEEKLEKELYRDARECLT

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

81.8

0.71

0.8

73.2

36.9

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

56.3

0.28

1.9

74.4

43.5

Associated Gene:

Gene:

MTX1

Ensembl Gene ID:

ENSAPLG00000011453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022271

2027415 - 2033776

6362

ENSAPLT00000020846

2027490 - 2033776

6287

ENSAPLT00000011950

2031574 - 2033776

2203