Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_2057655_2057735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2057655 - 2057735

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCCCAT

U12 Branch Point Sequence:

GCGCCCATAGCT

Flanking Amino Acid:

DCRSIRVALKDLLFSVCGLT

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

47.9

-0.1

1.3

55.8

41.7

Major PPT

74.1

0.54

0.8

65.5

36.1

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

47.8

-0

1.9

63.45

Associated Gene:

Gene:

FAM189B

Ensembl Gene ID:

ENSAPLG00000011814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047474

2054074 - 2059235

5162

ENSAPLT00000012299

2054074 - 2059235

5162