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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2062010_2062090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2062010 - 2062090

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGACAG

U12 Branch Point Sequence:

GCTTGTTTTACA

Flanking Amino Acid:

QAIGIPNWGFSGWILSLIAL

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

35.1

Major BPS

41.5

-0.5

1.6

46.4

Major PPT

82.2

0.72

0.9

75.5

38.3

Minor 5ss

34.3

-1.8

3.4

50.5

Minor BPS

49.6

-0

2.1

63.45

Associated Gene:

Gene:

SCAMP3

Ensembl Gene ID:

ENSAPLG00000028001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038737

2060222 - 2064074

3853

ENSAPLT00000037553

2060222 - 2063827

3606