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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2082034_2082190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2082034 - 2082190

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAGAAA

U12 Branch Point Sequence:

TTCTCTGTAGCT

Flanking Amino Acid:

LIRYIHQWEEIFHMTYDLAS

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.8

76.4

32.8

Major BPS

44.9

-0.3

1.2

32.8

Major PPT

73.2

0.52

0.8

64.7

36.5

Minor 5ss

28.3

-2.5

3.6

40.1

46.3

Minor BPS

0.2

2.2

79.24

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013268

2058321 - 2086285

27965