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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2083905_2084485_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2083905 - 2084485

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGGCTG

5'SS Class:

major

3'SS Sequence:

TCTCTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAA

U12 Branch Point Sequence:

GCCACCTCAATC

Flanking Amino Acid:

TKLSDGSYFGEICLLTRGRR

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

60.4

45.8

Major BPS

64.3

0.36

65.6

31.9

Major PPT

83.2

0.75

0.7

77.4

24.6

Minor 5ss

28.5

-2.5

3.3

30.2

42.9

Minor BPS

51.6

0.03

1.6

55.99

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013268

2058321 - 2086285

27965