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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2095830_2096203_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2095830 - 2096203

Intron Length:

374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCGGG

5'SS Class:

major

3'SS Sequence:

TGTTGTCCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

GCCGTGTTGACT

Flanking Amino Acid:

SRGALAEQKKALLIAVSTAV

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.2

47.1

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

70.6

0.46

66.3

40.8

Minor 5ss

41.3

-1

3.3

55.9

48.3

Minor BPS

45.3

-0.2

2.1

58.39

45.3

Associated Gene:

Gene:

RUSC1

Ensembl Gene ID:

ENSAPLG00000021575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018685

2093573 - 2100409

6837