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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2096281_2096538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2096281 - 2096538

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTGCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TTGTGCCTAAAT

Flanking Amino Acid:

FSTARNLVQKAQLGDSWLSP

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

75.6

0.58

0.8

72.4

32.3

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

52.4

0.15

2.2

78.03

43.9

Associated Gene:

Gene:

RUSC1

Ensembl Gene ID:

ENSAPLG00000021575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018685

2093573 - 2100409

6837